About Partek Genomics Suite
Partek Genomics Suite software offers an intuitive user interface and built-in workflows for a variety of genomic applications that guide researchers though every step of the analysis process.
Microarray
- Gene expression
- miRNA expression
- Exon expression
- Copy number
- Allele specific copy number
- Loss of Heterozygosity (LOH)
- Association
- Trio
- ChIP-chip
Next Generation Sequencing
- RNA-Seq
- miRNA-Seq
- ChIP-Seq
- DNA-Seq
- Methylation
Partek Genomics Suite software is built on a superior foundation of statistics, which are used to power information rich, and interactive visualizations, allowing researchers to easily interpret the biological meaning of their genomic data.
- Three-dimensional PCA plots to visualize data distribution and outliers
- Hierarchical clustering to classify vast numbers of genes into revealing patterns
- Profile trellis to identify groups of differentially expressed genes
- Venn diagrams to identify common and unique sample characteristics
- Motif discovery to determine binding-site motifs of sequences
- Gene Ontology Enrichment to determine gene grouping based on their molecular functions
- Chromosome viewer to visualize how samples map to the reference genome with customizable tracks for SNP detection, differential expression, peak detection, gene annotation, and methylation regions, all integrated into a single study
Registration & Access Info
- Must have Pitt email address
- Limited to on-campus computers
- Runs on PC & Mac & Linux