Skip to Main Content

HSLS MolBio Available Software

Bioinformatics software available to Pitt researchers.

About CLC Genomics Workbench

CLC Genomics Workbench (CLC Gx) is a powerful solution developed by scientists for scientists to analyze and visualize next generation sequencing (NGS) data. All the tools you need, integrated into a single user friendly and scalable application, and ready to generate results you can trust. Powered by cutting-edge technology and accelerated algorithms CLC Gx supports a comprehensive set of NGS data analysis applications, including rich trimming and quality control options.


  • Resequencing
  • Read mapping
  • Transcription factor ChIP-Seq
  • Bisulfite Sequencing
  • Workflows
  • De novo assembly
  • RNA-Seq
  • Histone ChIP-Seq plugin
  • Variant Analysis
  • Metagenomics
  • Clinical Microbiology
  • Molecular Biology

Registration & Access Info

Register here

  • Must have Pitt or UPMC email address
  • Must be connected to Pitt network
  • Runs on PC & Mac & Linux

System requirements