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HSLS MolBio Workshops

Information & resources for hands-on bioinformatics classes.

Objective

This page contains resources - PowerPoint slides, lecture videos, datasets for a software demonstration, etc. -  for HSLS molbio information service offered workshops on scRNA-seq data analysis using PartekFlow and CLC Genomics workbench.

Target Audience

Experimental biologists seeking to analyze scRNA-Seq data generated through experiments or retrieved from a repository such as GEO. The software covered in the workshop operates through a user-friendly, point-and-click graphical user interface, so neither programming experience nor familiarity with the command line interface is required.

Workshop Materials

PowerPoints

Lecture Videos

HSLS MBIS Workshop

scRNA-Seq

PartekFlow

CLC Genomics Workbench

Data Download

Software Registration

Selected Links

Software

References

Attribution

Please include the following statement in the acknowledgments section for all publications, posters, and presentations:

[software name, such as CLC Genomics workbench, Partek Flow ] software licensed through the Molecular Biology Information Service of the Health Sciences Library System, University of Pittsburgh was used for data analysis.