HSLS MolBio Workshops: Bulk RNA-Seq: Galaxy
Galaxy is a web-based platform for the biologist to perform Next-Generation Sequence analysis using open source bioinformatics software. It does not require programming or Linux command line experience. An institutional galaxy server is available for the Pitt research community through the Center for Research Computing.
This hands-on workshop teaches the basics of Galaxy including (1) the interface navigation and interaction and (2) how to perform a reference-based RNA-seq data analysis using open source bioinformatics software packages such as HISAT, FeatureCounts and DESeq2.
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